Publications

 

 

 

 

 

No.

Type

Year

Authors

Title

Journal

Volume

Accolades

50

Article

In Review

Rautsaw, R. M., S. A. Martin, B. A. Vincent, K. Lanctot, M. R. Bolt, R. A. Seigel, and C. L. Parkinson

Stopped dead in their tracks: The impact of railways on Testudine movement and behavior

 

 

 

49

Article

In Review

Rautsaw, R. M., S. A. Martin, K. Lanctot, B. A. Vincent, M. R. Bolt, R. A. Seigel, and C. L. Parkinson

On the road again: Assessing the use of roadsides as wildlife corridors for Gopher Tortoises (Gopherus polyphemus)

Journal of Herpetology

 

 

48

Article

In Review

Martin, S. A., R. M. Rautsaw, F. Robb, M. R. Bolt, C. L. Parkinson, and R. A. Seigel

Set AHDriFT: Applying Game Cameras to Drift Fences for Surveying Herpetofauna and Small Mammals

Wildlife Society Bulletin

 

 

47

Article

2017

Martin, S. A., R. M. Rautsaw, M. R. Bolt, C. L. Parkinson, and R. A. Seigel

Adapting Coastal Management to Climate Change: Mitigating our Shrinking Shorelines

Journal of Wildlife Management

 

Supplemental Material

46

Article

2016

Doan, T. M., A. J. Mason, T. A. Castoe, M. Sasa, and C. L. Parkinson

A cryptic palm-pitviper species (Squamata: Viperidae: Bothriechis) from the Costa Rican highlands, with notes on the variation within B. nigroviridis

Zootaxa

4138(2):271–290

 

45

Note

2016

Rautsaw, R. M., C. J. Yanick, S. Medina, C. L. Parkinson, S. A. Martin, and M. R. Bolt

Gopherus polyphemus (Gopher Tortoise). Predation

Herpetological Review

47(3):447–448

 

44

Article

2016

Reece, J. S., A. Alansari, H. M. Kalkvik, A. Alkindi, I. Mahmoud, A. Y. Al Kiyumi, A. E. Elshafie, M. P. Jensen, and C. L. Parkinson

A survey of the genetic diversity of the Loggerhead and Green Sea Turtles of the Sultanate of Oman

Bulletin of the Florida Museum of Natural History

54(6):104–117

 

43

Article

2016

Streicher, J. W., J. P. Mcentee, L. C. Drzich, D. C. Card, D. R. Schield, C. L. Parkinson, T. Jezkova, E. N. Smith, and T. A. Castoe

Genetic surfing, not allopatric divergence, explains spatial sorting of mitochondrial haplotypes in venomous coralsnakes

Evolution

70(7):1435–1449

 

42

Article

2016

Strickland, J. L., S. Carter, F. Kraus, and C. L. Parkinson

Snake evolution in Melanesia: Origin of the Hydrophiinae (Serpentes, Elapidae), and the evolutionary history of the enigmatic New Guinean elapid Toxicocalamus

Zoological Journal of the Linnean Society

178(3):663-678

 

41

Article

2014

Strickland, J. L., C. L. Parkinson, J. K. Mccoy, and L. K. Ammerman

Phylogeography of Agkistrodon piscivorus with Emphasis on the Western Limit of Its Range

Copeia

2014(4):639-649

 

40

Article

2013

Muthukrishnan, G., R. P. Lamers, A. Ellis, V. Paramanandam, A. B. Persaud, S. Tafur, C. L. Parkinson, and A. M. Cole

Longitudinal genetic analyses of Staphylococcus aureus nasal carriage dynamics in a diverse population

BMC Infectious Diseases

13(221):1-13

 

39

Article

2012

Castoe, T. A., J. W. Streicher, J. M. Meik, M. J. Ingrasci, A. W. Poole, A. P. J. de Koning, J. A. Campbell, C. L. Parkinson, E. N. Smith, and D. D. Pollock

Thousands of microsatellite loci from the venomous coralsnake Micrurus fulvius and variability of select loci across populations and related species

Molecular Ecology Resources

12:1105–1113

 

38

Article

2012

Kalkvik, H. M., I. J. Stout, and C. L. Parkinson

Unraveling natural versus anthropogenic effects on genetic diversity within the southeastern beach mouse (Peromyscus polionotus niveiventris)

Conservation Genetics

13:1653–1664

 

37

Article

2012

Lamers, R. P., G. Muthukrishnan, T. A. Castoe, S. Tafur, A. M. Cole, and C. L. Parkinson

Phylogenetic relationships among Staphylococcus species and refinement of cluster groups based on multilocus data

BMC Evolutionary Biology

12(171):1-15

 

36

Article

2011

Fenwick, A. M., H. W. Greene, and C. L. Parkinson

The serpent and the egg: Unidirectional evolution of reproductive mode in vipers?

Journal of Zoological Systematics and Evolutionary Research

50:59–66

 

35

Article

2011

Kalkvik, H. M., I. J. Stout, T. J. Doonan, and C. L. Parkinson

Investigating niche and lineage diversification in widely distributed taxa: phylogeography and ecological niche modeling of the Peromyscus maniculatus species group

Ecography

34:1–11

 

34

Article

2011

Lamers, R. P., J. W. Stinnett, G. Muthukrishnan, C. L. Parkinson, and A. M. Cole

 Evolutionary analyses of Staphylococcus aureus identify genetic relationships between nasal carriage and clinical isolates

PLoS ONE

6:1–12

 

33

Article

2010

Castoe, T. A., W. Gu, A. P. J. de Koning, J. M. Daza, Z. J. Jiang, C. L. Parkinson, and D. D. Pollock

Dynamic nucleotide mutation gradients and control region usage in Squamate reptile mitochondrial genomes

Cytogenetic and Genome Research

127:112–127

 

32

Article

2010

Daza, J. M., T. A. Castoe, and C. L. Parkinson

Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America

Ecography

33:343–354

 

31

Article

2009

Castoe, T. A., A. P. J. de Koning, H.-M. Kim, W. Gu, B. P. Noonan, G. Naylor, Z. J. Jiang, C. L. Parkinson, and D. D. Pollock

Evidence for an ancient adaptive episode of convergent molecular evolution

Proceedings of the National Academy of Sciences

106:8986–8991

Commentary

30

Article

2009

Castoe, T. A., J. M. Daza, E. N. Smith, M. M. Sasa, U. Kuch, J. A. Campbell, P. T. Chippindale, and C. L. Parkinson

Comparative phylogeography of pitvipers suggests a consensus of ancient Middle American highland biogeography

Journal of Biogeography

36:88–103

Journal Cover

29

Article

2009

Daza, J. M., E. N. Smith, V. P. Paez, and C. L. Parkinson

Complex evolution in the Neotropics: The origin and diversification of the widespread genus Leptodeira (Serpentes: Colubridae)

Molecular Phylogenetics and Evolutio

53:653–667

 

28

Article

2009

Fenwick, A. M., R. L. Gutberlet, J. A. Evans, and C. L. Parkinson

Morphological and molecular evidence for phylogeny and classification of South American pitvipers, genera Bothrops, Bothriopsis, and Bothrocophias (serpentes: Viperidae)

Zoological Journal of the Linnean Society

156:617–640

Supplementary

27

Article

2009

Metzger, G. A., F. Kraus, A. Allison, and C. L. Parkinson

Uncovering cryptic diversity in Aspidomorphus (Serpentes: Elapidae): Evidence from mitochondrial and nuclear markers

Molecular Phylogenetics and Evolution

54:405–416

 

26

Article

2009

Suazo, A. A., J. E. Fauth, J. D. Roth, C. L. Parkinson, and I. J. Stout

Responses of small rodents to habitat restoration and management for the imperiled Florida Scrub-Jay

Biological Conservation

142:2322–2328

 

25

Article

2007

Castoe, T. A., C. L. Spencer, and C. L. Parkinson

Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): A perspective on North American desert biogeography

Molecular Phylogenetics and Evolution

42:193–212

 

24

Article

2007

Castoe, T. A., E. N. Smith, R. M. Brown, and C. L. Parkinson

Higher-level phylogeny of Asian and American coralsnakes, their placement within the Elapidae (Squamata), and the systematic affinities of the enigmatic Asian coralsnake Hemibungarus calligaster (Wiegmann, 1834)

Zoological Journal of the Linnean Society

151:809–831

 

23

Article

2007

Degner, J. F., I. J. Stout, J. D. Roth, and C. L. Parkinson

Population genetics and conservation of the threatened southeastern beach mouse (Peromyscus polionotus niveiventri): Subspecies and evolutionary units

Conservation Genetics

8:1441–1452

 

22

Article

2007

Jiang, Z. J., T. A. Castoe, C. C. Austin, F. T. Burbrink, M. D. Herron, J. A. McGuire, C. L. Parkinson, and D. D. Pollock

Comparative mitochondrial genomics of snakes: extraordinary substitution rate dynamics and functionality of the duplicate control region

BMC Evolutionary Biology 

7(123): 1-14

 

21

Article

2006

Castoe, T. A., and C. L. Parkinson

Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes)

Molecular Phylogenetics and Evolution

39:91–110

 

20

Article

2006

Reece, J. S., L. M. Ehrhart, and C. L. Parkinson

Mixed stock analysis of juvenile loggerheads (Caretta caretta) in Indian River Lagoon, Florida: Implications for conservation planning

Conservation Genetics

7:345–352

 

19

Article

2005

Castoe, T. A., M. M. Sasa, and C. L. Parkinson

Modeling nucleotide evolution at the mesoscale: The phylogeny of the Neotropical pitvipers of the Porthidium group (Viperidae: Crotalinae)

Molecular Phylogenetics and Evolution 

37:881–898

 

18

Article

2005

Herron, M. D., J. M. Waterman, and C. L. Parkinson

Phylogeny and historical biogeography of African ground squirrels: The role of climate change in the evolution of Xerus

Molecular Ecology 

14:2773–2788

 

17

Article

2005

Mulvaney, A., T. A. Castoe, K. G. Ashton, K. L. Krysko, and C. L. Parkinson

Evidence of Population Genetic Structure within the Florida Worm Lizard, Rhineura floridana (Amphisbaenia: Rhineuridae)

Journal of Herpetology

39:118–124

 

16

Article

2005

Parkinson, C. L., J. P. Mower, Y.-L. Qiu, A. J. Shirk, K. Song, N. D. Young, C. W. DePamphilis, and J. D. Palmer

Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae

BMC Evolutionary Biology 

5(73): 1-12

 

15

Article

2005

Reece, J. S., T. A. Castoe, and C. L. Parkinson

Historical perspectives on population genetics and conservation of three marine turtle species

Conservation Genetics

6:235–251

 

14

Article

2005

Wiens, J. J., J. W. Fetzner, C. L. Parkinson, and T. W. Reeder

Hylid frog phylogeny and sampling strategies for speciose clades

Systematic Biology 

54:778–807

 

13

Article

2004

Castoe, T. A., T. M. Doan, and C. L. Parkinson

Data partitions and complex models in bayesian analysis: The phylogeny of Gymnopthalmid lizards

Systematic Biology

53:448–469

 

12

Article

2004

Herrmann, H.-W., T. Ziegler, A. Malhotra, R. S. Thorpe, and C. L. Parkinson

Redescription and systematics of Trimeresurus cornutus (Serpentes : Viperidae) based on morphology and molecular data

Herpetologica

60:211–221

 

11

Article

2004

Herron, M. D., T. A. Castoe, and C. L. Parkinson

Sciurid phylogeny and the paraphyly of Holarctic ground squirrels (Spermophilus)

Molecular Phylogenetics and Evolution

31:1015–1030

 

10

Article

2003

Castoe, T. A., P. T. Chippindale, J. A. Campbell, L. K. Ammerman, and C. L. Parkinson

Molecular systematics of the Middle American jumping pitvipers (Genus Atropoides) and phylogeography of the Atropoides nummifer complex

Herpetologica

59:420–431

 

9

Article

2003

Daniell, H., and C. L. Parkinson

Jumping genes and containment

Nature Biotechnology

21:374–375

 

8

Article

2002

Parkinson, C. L., J. A. Campbell, and P. T. Chippindale

Multigene phylogenetic analysis of pitvipers, with comments on their biogeography

Biology of Vipers

93–110

 

7

Article

2000

Chaw, S. M., C. L. Parkinson, Y. Cheng, T. M. Vincent, and J. D. Palmer

Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers

Proceedings of the National Academy of Sciences 

 97:4086–4091

 

6

Article

2000

Nickrent, D. L., C. L. Parkinson, J. D. Palmer, and R. J. Duff

Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants

Molecular Biology and Evolution

17:1885–1895

 

5

Article

2000

Palmer, J. D., K. L. Adams, Y. Cho, C. L. Parkinson, Y.-L. Qiu, and K. Song

Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates

Proceedings of the National Academy of Sciences 

97:6960–6966.

 

4

Article

2000

Parkinson, C. L., K. R. Zamudio, and H. W. Greene

Phylogeography of the pitviper clade Agkistrodon: Historical ecology, species status, and conservation of cantils

Molecular Ecology

9:411–420

 

3

Article

1999

Parkinson, C. L.

Molecular systematics and biogeographical history of pitvipers as determined by Mitochondrial Ribosomal DNA Sequences

Copeia

1999: 576-568

 

2

Article

1999

Parkinson, C. L., K. L. Adams, and J. D. Palmer

Multigene analyses identify the three earliest lineages of extant flowering plants

Current Biology

9:1485–1488

 

1

Article

1997

Parkinson, C. L., S. M. Moody, and J. E. Ahlquist

Phylogenetic relationships of the "Agkistrodon Complex” based on mitochondrial DNA sequence data

Venomous Snakes: Ecology, Evolution and Snakebite

63-78