{"id":502,"date":"2017-01-07T01:52:55","date_gmt":"2017-01-07T06:52:55","guid":{"rendered":"https:\/\/sciences.ucf.edu\/biology\/d4lab\/?page_id=502"},"modified":"2024-04-10T15:51:59","modified_gmt":"2024-04-10T19:51:59","slug":"methods-2","status":"publish","type":"page","link":"https:\/\/sciences.ucf.edu\/biology\/d4lab\/methods-2\/","title":{"rendered":"Methods 2"},"content":{"rendered":"<p><a href=\"https:\/\/www.cambridgescholars.com\/product\/978-1-5275-7587-5\"><img decoding=\"async\" id=\"image\" style=\"width: 100%;height: 80px\" src=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/banner4.png\" \/><\/a><\/p>\n<h1 style=\"text-align: center\">Methods in Experimental Ecology II (PCB 6468)<\/h1>\n<div class=\"title-head\">Course Information<\/div>\n<ul>\n<li><strong>Time:<\/strong> Wednesdays &amp; Fridays (2:30-3:20pm)<\/li>\n<li><strong>Room:<\/strong> Bio 305<\/li>\n<li><strong>Instructors:<\/strong> Pedro F. Quintana-Ascencio &amp; Michelle Bardales Cruz<\/li>\n<\/ul>\n<div class=\"title-head\">Description<\/div>\n<p>This course will assist graduate students to design, analyze and interpret their own experiments and observations and establish a research program in ecology and other biological fields. This course reviews basic analytical tools needed to collect, organize and interpret ecological data in a critical way. It is based on the revision of case studies illustrating frequent research problems and the discussion of potential solutions. As much as possible, several alternative approaches are evaluated and compared. This class complements courses on basic statistics and is directed to beginning graduate and senior undergraduate researchers. The course confronts concepts in experimental design, execution and analysis as a tool to improve ecological research.<\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Methods-in-Experimental-Ecology-II-Syllabus-2024.pdf\">Syllabus 2024<\/a><\/p>\n<div class=\"title-head\">Materials<\/div>\n<div><\/div>\n<p><a href=\"https:\/\/github.com\/rmcelreath\/rethinking\">Installing rstan and rethinking<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/methods-2-old\/\">Old Methods 2 (Frequentist and JAGS)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/old-methods\/\">Extra Material (from Old Methods 1)<\/a><\/p>\n<div align=\"center\">\n<p>&nbsp;<\/p>\n<table style=\"height: 364px;width: 100%;background-color: #dedede\">\n<tbody>\n<tr style=\"background-color: #53734a;color: #ffffff;height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\"><strong>Session<\/strong><\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><strong>Topic<\/strong><\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><strong>PDFs<\/strong><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><strong>Scripts and Data<\/strong><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><strong>Excercises<\/strong><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">I<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/Methods-in-Experimental-Ecology-II-presentation-2023.pdf\">Class Presentation<\/a><\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/Gigerenzer-2004-Mindless-Statistics.pdf\">Gigerenzer 2004<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2022\/01\/A-small-exercise-on-p_values.txt\">Exercise 0 (in class)<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Extra_Credit.pdf\"> Extra Credit<\/a><br \/>\n<a href=\"https:\/\/ucf-my.sharepoint.com\/:x:\/g\/personal\/mi558040_ucf_edu\/EfphMFBXPZZLn8sD9POyHjoBL130_EQv7XLBz-TBkybDow?e=F9RDr6&amp;CID=24fca06d-3fbc-896a-e98e-9550f0142383\"> EC excel file<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-1.pdf\">Exercise 1<\/a><br \/>\n<a href=\"https:\/\/ucf-my.sharepoint.com\/:x:\/r\/personal\/mi558040_ucf_edu\/Documents\/Attachments\/Exercise%201%20excel%20file.xlsx?d=wc16905a0fcb0428a81565d9de91a8562&amp;csf=1&amp;web=1&amp;e=vaCBed\"> EX 1 excel file<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">II<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Assumptions<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk2_Assumptions_Demo_2024.pdf\">Assumptions Demo<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/Dushoff_et_al-2019-Methods_in_Ecology_and_Evolution.pdf\">Dushoff et al. 2019<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/Assumptions-2024-2.txt\">Assumptions Script<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/hypericum_data_94_07.txt\">Hypericum Data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-2.pdf\">Exercise 2<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise2_data_2024.txt\">EX2 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">III<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Analysis Frameworks<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk3_Frameworks_Demo_2024.pdf\">Frameworks Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/Ant-Nests-2024-2.txt\">Frameworks Script<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2018\/01\/Ant_Nest_Data.txt\">Frameworks Data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-3.pdf\">Exercise 3<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/mollusk.txt\">EX3 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">Extra<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Probability, likelihood, and MCMC<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2022\/02\/likelihood-code.txt\">Likelihood script<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2022\/02\/Metropolis.txt\">MCMC script<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/02\/likelihoodPoisson.txt\">Poisson &#8211; Comparison<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">IV<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Analysis<br \/>\nof Averages<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk4_Averages_Demo_2024.pdf\">Averages Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Averages_2024.txt\">Averages Script<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/hypericum_data_94_07.txt\">Hypericum Data<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/popmeanHc.txt\">pop mean data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-4-2024.pdf\">Exercise 4<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">V<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Logistic Regressions<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk5_Logistic_Regression_2024.pdf\">Regression Demo<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2018\/02\/Low-D-carie_et_al-2014-Frontiers_in_Ecology_and_the_Environment.pdf\">Low-Decarie et al.<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/Logistic_Regression_2024.txt\">Logistic Regression Script<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/Hypericum_survival.txt\">Hypericum Survival Data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-5-2024.pdf\">Exercise 5<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/Ex5_Data.txt\">EX5 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">VI<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Non-Linear<br \/>\nRelationships<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk6_Non-linear-relationships_2024.pdf\">Non-Linear Relationships Demo<\/a><\/p>\n<p>&nbsp;<\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/Ellison2004.pdf\">Ellison 2004<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/Gordon_et_al-1998-Restoration_Ecology.pdf\">Gordon et al. 1998<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/Morris_etal2015.pdf\">Morris et al. 2015<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/wg_priors_script_2024.txt\">wg_priors (script)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/Wire_Grass_2024.txt\">wire grass (script)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/wg_priors.txt\">wg_priors (data)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/wg_data.txt\">wg_data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-6-2024.pdf\">Exercise 6<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/02\/Priors-in-Ecology.pdf\">McCarthy and Masters 2005<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/02\/Priors-from-expert-opinion.pdf\">Choy et al. 2009<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">VII<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Count Data<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk7_Count-Data_2024.pdf\">Count Data Demo<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/02\/OHanlon_etal2014.pdf\">OHanlon et al. 2014<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/Mantis_2024.txt\">Mantis R (script)<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/mantis.txt\">Mantis (data)<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-7-2024.pdf\">Exercise\u00a07<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/Ex7_Data.txt\">EX7 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">VIII<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Linear Mixed Models<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk8_Linear-Mixed-Models_2024.pdf\">Linear Mixed Models Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/02\/LMM_2024.txt\">LMM (script)<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/hypericum_data_94_07.txt\">Hypericum Data<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-8-2024.pdf\">Exercise 8<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/Ex_7-2019.txt\">EX8 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">IX<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Model Selection of Mixed Models<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk9_Model-selection-Mixed-models_2024.pdf\">Mixed Model Selection Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/03\/Mixed_LMM_2024.txt\">Mixed Model Selection (script)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/coordinates-_balds.txt\">Coordinates Balds (script)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/generate_distant_matrix.txt\">Distance Matrix (script)<\/a><br \/>\n<a>&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;-<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/hypericum_data_94_07.txt\">Hypericum Data<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/Bald_coordinates.txt\">Bald Coordinates<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/BaldDistAndArea_2011.txt\">Bald Dist and Area<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/Bald_mat_dis.txt\">Bald distance matrix<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/01\/Relative_elevation_all.txt\">Relative Elevation<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-9-2024.pdf\">Exercise 9<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/02\/Aho-etal-2014.pdf\">Aho et al. 2014<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/02\/Aho_et_al-2017-Methods_in_Ecology_and_Evolution.pdf\">Aho_et_al. 2017<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/02\/Bolker-et-al-2009-TREE.pdf\">Bolker et al. 2009<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">X<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Model Selection of<br \/>\nMixed Models Binary<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk10_Model-selection-Mixed-models-binary_2024.pdf\">Mixed Model Selection Binary Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/03\/Week_10_Mixed_GLM_Binary_2024.txt\">Mixed GLM (script)<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/01\/hypericum_data_94_07.txt\">Hypericum Data<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2018\/03\/chaos.txt\">Chaos<\/a>(EXTRA)<\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-10-2024.pdf\">Exercise 10<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/04\/Ex10_data.txt\">EX10 data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">XI<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Zero Inflated Models<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk11_Zero-Inflated-Count-Data_2024.pdf\">Zero Inflated Models Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/03\/Week_11_Zero_Inflated_2024.txt\">Zero Inflated (script)<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/03\/dataforstats_final_BB121613.txt\">Data for Demo<\/a><\/p>\n<p><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/03\/Zero-inflated-Martin.pdf\">Martin et al.<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-11-2024.pdf\">Exercise 11<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2023\/01\/Ex11_Data.txt\">EX11 Data<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 24px\">XII<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\">Non-linear Count Data<\/td>\n<td style=\"width: 22%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Wk12_Non-linear-count-data_2024.pdf\">Non Linear Counts Demo<\/a><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/04\/Week_12_Nonlinear_Counts_2024_2.txt\">Non Linear Counts (script)<\/a><br \/>\n<a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2020\/04\/Macro-for-classupdated.txt\">Non Linear Counts &#8211; updated (script)<\/a><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2017\/03\/dataforstats_final_BB121613.txt\">Data for Demo<\/a><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 24px\"><a href=\"https:\/\/sciences.ucf.edu\/biology\/d4lab\/wp-content\/uploads\/sites\/23\/2024\/01\/Exercise-12-2024.pdf\">Exercise 12\u00a0<\/a><\/td>\n<\/tr>\n<tr style=\"height: 24.6306px\">\n<td style=\"width: 6%;text-align: center;height: 28px\">XIII<\/td>\n<td style=\"width: 22%;text-align: center;height: 28px\">TBD<\/td>\n<td style=\"width: 22%;text-align: center;height: 28px\"><\/td>\n<td style=\"width: 22.0486%;text-align: center;height: 28px\"><\/td>\n<td style=\"width: 19.9514%;text-align: center;height: 28px\"><a>Exercise 13<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n<div>** = file in .docx format due to incompatibility with host &#8211; copy paste into R!<\/div>\n<div><\/div>\n","protected":false},"excerpt":{"rendered":"<p>Methods in Experimental Ecology II (PCB 6468) Course Information Time: Wednesdays &amp; Fridays (2:30-3:20pm) Room: Bio 305 Instructors: Pedro F. 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