{"id":14,"date":"2016-09-06T19:48:40","date_gmt":"2016-09-06T23:48:40","guid":{"rendered":"http:\/\/www.debekkerlab.com\/?page_id=14"},"modified":"2022-02-09T09:55:46","modified_gmt":"2022-02-09T14:55:46","slug":"publications","status":"publish","type":"page","link":"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Publications on fungal entomopathogens, other parasites, and insect behavior:<\/strong><\/h2>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
\"\"<\/a><\/td>\n\n
de Bekker, C., Das, B.\u00a0<\/strong>(2022):
\nHijacking time: How\u00a0<\/span>Ophiocordyceps<\/i>\u00a0fungi could be using ant host clocks to manipulate behavior<\/span><\/div>\n
In: Parasite Immunology doi:10.1111\/pim.12909<\/em><\/div>\n<\/td>\n<\/tr>\n
<\/a><\/td>\n\n
Das, B., de Bekker, C.\u00a0<\/strong>(2022):<\/div>\n
Time-course RNASeq of\u00a0<\/span>Camponotus floridanus<\/i>\u00a0forager and nurse ant brains indicate links between plasticity in the biological clock and behavioral division of labor<\/span><\/div>\n
In: BMC Genomics 23, 57<\/em><\/div>\n<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\n\n
Trinh, T., Ouellette, R., de Bekker, C.<\/strong> (2021):<\/div>\n
Getting lost: the fungal hijacking of ant foraging behaviour in space and time<\/div>\n
In: Animal Behaviour 181, 165-184<\/em><\/div>\n<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\n\n
de Bekker, C., Beckerson,<\/b> W.C.<\/strong>, Elya, C. (2021):<\/div>\n
Mechanisms behind the madness: How do zombie-making fungal entomopathogens affect host behavior to increase transmission?<\/div>\n
In: mBio, e0187221<\/i><\/div>\n<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nWill, I., Das, B., Trinh, T.,\u00a0<\/strong>Brachmann, A., Ohm, R.A., de Bekker, C.<\/strong> (2020):
\nGenetic underpinnings of host manipulation by Ophiocordyceps<\/em> as revealed by comparative transcriptomics.
\nIn: G3: Genes, Genomes, Genetics 10(7), 2275-2296<\/em><\/td>\n<\/tr>\n
<\/a><\/td>\nde Bekker, C.<\/strong> (2019):
\nOphiocordyceps<\/em>-ant interactions as an integrative model to understand the molecular basis of parasitic behavioral manipulation.
\nIn: Curr. Opin. Insect Sci.<\/em>\u00a033, 19-24<\/i><\/td>\n<\/tr>\n
<\/a><\/td>\nWestwood, M.L., O\u2019Donnell, A.J., de Bekker, C.<\/strong>, Lively, C.M., Zuk, M., Reece, S.E. (2019):
\nThe evolutionary ecology of circadian rhythms in infection.
\nIn: Nat. Ecol. Evol. 3, 552\u2013560\u00a0<\/em><\/td>\n<\/tr>\n
<\/a><\/td>\nAndriolli, F.S., Ishikawa, N.K., Isla, R.V., Cabral, T.S.,\u00a0de Bekker, C.<\/strong>, Baccaro, F.B. (2019):
\nDo zombie ant fungi turn their hosts into light seekers?
\nIn: Behav. Ecol. 30(3), 609-616<\/em><\/td>\n<\/tr>\n
<\/a><\/td>\nde Bekker, C.<\/strong>, Will, I., Das, B.,<\/strong> Adams, R.M.M. (2018):
\nThe ants (Hymenoptera: Formicidae) and their parasites: effects of parasitic manipulations and host responses on ant behavioral ecology.
\nIn: Myrmecol. News 28, 1-24<\/em><\/td>\n<\/tr>\n
<\/a><\/td>\nSol\u00e1-Gracia, E., de Bekker, C.<\/strong>, Russell, J., Manlove, K., Hanks, E., Hughes, D.P. (2018):
\nWithin the fortress: A specialized parasite is not discriminated against in a social insect society.
\nIn: PLoS ONE 13(2): e0193536<\/em><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Will, I.,<\/strong> Hughes, D.P., Brachmann, A., Merrow, M. (2017):
\n<\/a>Daily rhythms and enrichment patterns in the transcriptome of the behavior-manipulating parasite\u00a0Ophiocordyceps kimflemingiae.
\nIn:\u00a0<\/i>PLoS ONE12(11): e0187170<\/i><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\n\u00a0de Bekker, C.<\/strong>, Ohm, R.A., Evans, H.C., Brachmann, A., Hughes, D.P. (2017):
\nAnt-infecting\u00a0Ophiocordyceps\u00a0<\/em>genomes reveal a high diversity of potential behavioral manipulation genes and a possible major role for enterotoxins.
\nIn: Scientific Reports 7(1):12508<\/em><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nHughes, D.P., Ara\u00fajo, J.P.M., Loreto R.G., Quevillon, L.E., de Bekker, C.<\/strong><\/strong>, Evans, H.C. (2016):
\nFrom so simple a beginning: the evolution of behavioral manipulation by fungi.
\nIn: Advances in Genetics 94, 437-469<\/em><\/span><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Ohm, R.A., Loreto, R.G., Sebastian, A., Albert, I., Merrow, M., Brachmann, A., Hughes, D.P. (2015):
\nGene expression during zombie ant biting behavior reflects the complexity underlying fungal parasitic behavioral manipulation.
\nIn: BMC Genomics 16:620<\/em>
\n<\/span><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nChetouhi, C., Panek, J., Bonhomme, L., ElAlaoui, H., Texier, C., Langin, T., de Bekker, C.<\/b>, Urbach, S., Demettre, E., Miss\u00e9, D., Holzmuller, P., Hughes, D.P., Zanzoni, A., Brun, C., Biron, D.G. (2015):
\n<\/span>Cross-talk in host-parasite associations: what do past and recent proteomics tools tell us?
\nIn: Infection, Genetics and Evolution<\/em> <\/span>DOI:10.1016\/j.meegid.2015.04.015<\/span><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Quevillon, L.E., Smith, P.B., Fleming, K.R., Ghosh, D., Patterson, A.D., Hughes, D.P. (2014):
\nSpecies-specific ant brain manipulation by a specialized fungal parasite.
\nIn: BMC Evolutionary Biology 14:166<\/em><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Merrow, M., Hughes, D.P. (2014):
\nFrom behavior to mechanisms: An integrative approach to the manipulation by a parasitic fungus (Ophiocordyceps unilateralis s.l.<\/em>) of its host ants (Camponotus <\/em>spp.).
\nIn: Integrative and Comparative Biology 54(2), 166-176<\/em><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Smith, P.B., Patterson, A.D., Hughes, D.P. (2013):
\nMetabolomics reveals the heterogeneous response of entomopathogenic fungi in ex vivo<\/em> cultured insect tissues.
\nIn: PLoS ONE 8(8):e70609<\/em><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

Other Publications:<\/h2>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
\"\"<\/a><\/td>\nHughes<\/span>, M.E.,\u00a0Abruzzi<\/span>, K.C.,\u00a0Allada<\/span>, R.,\u00a0Anafi<\/span>, R.,\u00a0Arpat<\/span>, A.B.,\u00a0Asher<\/span>, G.,\u00a0Baldi<\/span>, P.,\u00a0de Bekker<\/span>, C.<\/strong>,\u00a0Bell-Pedersen<\/span>, D.,\u00a0Blau<\/span>, J.,\u00a0Brown<\/span>, S.,\u00a0Ceriani<\/span>, M.F.,\u00a0Chen<\/span>, Z.,\u00a0Chiu<\/span>, J.C.,\u00a0Cox<\/span>, J.,\u00a0Crowell, A.M.,\u00a0<\/span>DeBruyne<\/span>, J.P.,\u00a0Dijk<\/span>, D.-J.,\u00a0DiTacchio<\/span>, L.,\u00a0Doyle<\/span>, F.j.,\u00a0Duffield<\/span>, G.E.,\u00a0Dunlap<\/span>, J.C.,\u00a0Eckel-Mahan<\/span>, K.,\u00a0Esser<\/span>, K.A.,\u00a0FitzGerald<\/span>, G.A.,\u00a0Forger<\/span>, D.B.,\u00a0Francey<\/span>, L.J.,\u00a0Fu<\/span>, Y.-H.,\u00a0Gachon<\/span>, F.,\u00a0Gatfield<\/span>, D.,\u00a0de Goede<\/span>, P.,\u00a0Golden<\/span>, S.S.,\u00a0Green<\/span>, C.,\u00a0Harer<\/span>, J.,\u00a0Harmer<\/span>, S.,\u00a0Haspel<\/span>, J.,\u00a0Hastings<\/span>, M.H.,\u00a0Herzel<\/span>, H.,\u00a0Herzog<\/span>, E.D.,\u00a0Hoffmann<\/span>, C.,\u00a0Hong<\/span>, C.,\u00a0Hughey<\/span>, J.J.,\u00a0Hurley<\/span>, J.M.,\u00a0de la Iglesia<\/span>, H.O.,\u00a0Johnson<\/span>, C.,\u00a0Kay<\/span>, S.A.,\u00a0Koike<\/span>, N.,\u00a0Kornacker<\/span>, K.,\u00a0Kramer<\/span>, A.,\u00a0Lamia<\/span>, K.,\u00a0Leise<\/span>, T.,\u00a0Lewis<\/span>, S.A.,\u00a0Li<\/span>, J.,\u00a0Li<\/span>, X.,\u00a0Liu<\/span>, A.C.,\u00a0Loros<\/span>, J.J.,\u00a0Martino<\/span>, T.A.,\u00a0Menet<\/span>, J.S.,\u00a0Merrow<\/span>, M.,\u00a0Millar<\/span>, A.J.,\u00a0Mockler<\/span>, T.,\u00a0Naef<\/span>, F.,\u00a0Nagoshi<\/span>, E.,\u00a0Nitabach<\/span>, M.N.,\u00a0Olmedo<\/span>, M.,\u00a0Nusinow<\/span>, D.A.,\u00a0Pt\u00e1\u010dek<\/span>, L.J.,\u00a0Rand<\/span>, D.,\u00a0Reddy<\/span>, A.B.,\u00a0Robles<\/span>, M.S.,\u00a0Roenneberg<\/span>, T.,\u00a0Rosbash<\/span>, M.,\u00a0Ruben<\/span>, M.D.,\u00a0Rund<\/span>, S.S.C.,\u00a0Sancar<\/span>, A.,\u00a0Sassone-Corsi<\/span>, P.,\u00a0Sehgal<\/span>, A.,\u00a0Sherrill-Mix<\/span>, S.,\u00a0Skene<\/span>, D.J.,\u00a0Storch<\/span>, K.-F.,\u00a0Takahashi<\/span>, J.S.,\u00a0Ueda<\/span>, H.R.,\u00a0Wang<\/span>, H.,\u00a0Weitz<\/span>, C.,\u00a0Westermark<\/span>, P.O.,\u00a0Wijnen<\/span>, H.,\u00a0Xu<\/span>, Y.,\u00a0Wu<\/span>, G.,\u00a0Yoo<\/span>, S.-H.,\u00a0Young<\/span>, M.,\u00a0Zhang<\/span>, E.E.,\u00a0Zielinski<\/span>, T.,\u00a0Hogenesch, J.B. (2017):
\n<\/span>Guidelines for Genome-Scale Analysis of Biological Rhythms
\nIn: Journal of Biological Rhythms xx(x):1-14<\/em><\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nWang, F., Krijgsheld, P., Hulsman, M., de Bekker, C.<\/strong>, M\u00fcller, W.H., Reinders, M., de Vries, R.P., W\u00f6sten, H.A.B. (2014):
\nFluG affects secretion in colonies of Aspergillus niger<\/em>.
\nIn: Antonie van Leeuwenhoek Journal of Microbiology 107(1), 225-240<\/em><\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nW\u00f6sten, H.A.B., van Veluw, G.J., de Bekker, C.<\/strong>, Krijgsheld, P. (2013):
\nHeterogeneity in the mycelium; implications for the use of fungi as cell factories.
\nIn: Biotechnology Letters 35, 1155-1164<\/em>11<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nvan Veluw, G.J., Teertstra, W.R., de Bekker, C.<\/strong>, Vinck, A., van Beek, N., Muller, W.H., Arentshorst, M., van der Mei. H.C., Ram, A.F.J., Dijksterhuis, J., W\u00f6sten, H.A.B. (2013):
\nHeterogeneity in liquid shaken cultures of Aspergillus niger<\/em> inoculated with melanised conidia of pigmentation mutants.
\nIn: Studies in Mycology 74(1), 47-57<\/em>10<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nde Bekker, C.<\/strong>, Bruning, O., Jonker, M.J., Breit, T.M., W\u00f6sten, H.A.B. (2011):
\nSingle cell transcriptomics of neighboring hyphae of Aspergillus niger<\/em>.
\nIn: Genome Biology 12:R71<\/em>9<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nOhm, R.A., de Jong, J.F., de Bekker, C.<\/strong>, Lugones, L.G., W\u00f6sten, H.A.B. (2011):
\nTranscription factor genes of Schizophyllum commune<\/em> involved in regulation of mushroom formation.
\nIn: Molecular Microbiology 81(6), 1433-1445<\/em>8<\/td>\n<\/tr>\n
\"\"<\/a><\/td>\nde Bekker, C.<\/strong>, van Veluw, G.J., Vinck, A., Wiebenga, L.A., W\u00f6sten, H.A.B. (2011):
\nHeterogeneity in Aspergillus niger <\/em>micro-colonies in liquid shaken cultures.
\nIn: Applied and Environmental Microbiology 77(4), 1263-1267<\/em>7<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Vinck, A., Ossin, A., Ohm, R.A., de Vries, R.P., W\u00f6sten, H.A.B. (2011):
\nHeterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus niger <\/em>colonies.
\nIn: Environmental Microbiology 13(1), 216-225<\/em>6<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Jong, J.F., Ohm, R.A., de Bekker, C.<\/strong>, W\u00f6sten, H.A.B., Lugones, L.G. (2010):
\nInactivation of ku80<\/em> in the mushroom forming fungus Schizophyllum commune<\/em> decreases transformation efficiency and increases the relative incidence of homologous recombination.
\nIn: FEMS Microbiology Letters 310(1), 91-95<\/em>5<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, Wiebenga, A., Aguilar, G., W\u00f6sten, H.A.B. (2009):
\nAn enzyme cocktail for efficient protoplast formation in Aspergillus niger<\/em>.
\nIn: Journal of Microbiological Methods 76(3), 305-306<\/em>3<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nvan Peer, A.F., de Bekker, C.<\/strong>, Vinck, A., W\u00f6sten, H.A.B., Lugones, L.G. (2009):
\nPhleomycin increases transformation efficiency and promotes single integrations in Schizophyllum commune<\/em>.
\nIn: Applied and Environmental Microbiology 75(5), 1243-1247<\/em>2<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nLevin, A.M., de Vries, R.P., Conesa, A., de Bekker, C.<\/strong>, Talon, M., Menke, H.H., Van Peij, N.N.M.E., W\u00f6sten, H.A.B. (2007):
\nSpatial differentiation in the vegetative mycelium of Aspergillus niger.
\nIn: Eukaryotic Cell 6(12), 2311-2322<\/em>1<\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nSivanathan, V., Allen, M.D., de Bekker, C.<\/strong>, Baker, R., Arciszewska, L.K., Freund, S.M., Bycroft, M., Sherratt, D.J. (2006):
\nThe FtsK gamma domain directs oriented DNA translocation by interacting with KOPS.
\nIn: Nature Structural and Molecular Biology 13(11), 965-972<\/em><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

Other Written Contributions (Not Peer-Reviewed):<\/h2>\n\n\n\n\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong> (2017):
\n<\/span>Manipulating fungi. (written in Dutch: \u201cManipulatieve schimmels.\u201d)
\nIn: Schimmels. Van plaag tot bouwmeester. Biowetenschappen en Maatschappij, kwartaal 4, 35<\/em><\/span><\/td>\n<\/tr>\n
\"Link<\/a><\/td>\nde Bekker, C.<\/strong>, van Veluw, G.J., & Bongaarts, R. (2009):
\nAnalysis and sorting of Aspergillus niger <\/em>pellets based on size and fluorescence intensity measurements.
\nIn: COPAS QTN 015, 1-4<\/em><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"

Publications on fungal entomopathogens, other parasites, and insect behavior: de Bekker, C., Das, B.\u00a0(2022): Hijacking time: How\u00a0Ophiocordyceps\u00a0fungi could be using ant host clocks to manipulate […]<\/a><\/p>\n<\/div>","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-full.php","meta":{"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"yoast_head":"\nPublications - De Bekker Lab<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - De Bekker Lab\" \/>\n<meta property=\"og:description\" content=\"Publications on fungal entomopathogens, other parasites, and insect behavior: de Bekker, C., Das, B.\u00a0(2022): Hijacking time: How\u00a0Ophiocordyceps\u00a0fungi could be using ant host clocks to manipulate [...]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/publications\/\" \/>\n<meta property=\"og:site_name\" content=\"De Bekker Lab\" \/>\n<meta property=\"article:modified_time\" content=\"2022-02-09T14:55:46+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/wp-content\/uploads\/sites\/25\/2017\/02\/Reading-Icon-1.png\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"13 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/publications\/\",\"url\":\"https:\/\/sciences.ucf.edu\/biology\/debekkerlab\/publications\/\",\"name\":\"Publications - 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