{"id":613,"date":"2014-07-18T13:57:20","date_gmt":"2014-07-18T17:57:20","guid":{"rendered":"http:\/\/jenkins.cos.ucf.edu\/?page_id=613"},"modified":"2014-07-18T13:57:20","modified_gmt":"2014-07-18T17:57:20","slug":"r-resources","status":"publish","type":"page","link":"https:\/\/sciences.ucf.edu\/biology\/jenkins\/classes\/pcb-6466\/r-resources\/","title":{"rendered":"R Resources"},"content":{"rendered":"<p><span style=\"text-decoration: underline\"><strong>Why use R?<br \/>\n<\/strong><\/span><\/p>\n<ul>\n<li><a href=\"http:\/\/r4stats.com\/articles\/popularity\/\">Muenchen, RA. The popularity of data analysis software<\/a><\/li>\n<li><a href=\"http:\/\/r4stats.com\/2013\/08\/07\/trends-in-the-analytics-job-market\/\">Muenchen, RA. Trends in the analytics job market<\/a><\/li>\n<\/ul>\n<p><span style=\"text-decoration: underline\"><strong>R &amp; RStudio Links<\/strong><\/span><\/p>\n<ul>\n<li><a href=\"http:\/\/swirlstats.com\">swirl<\/a> &#8211; a great way to learn your way around R<\/li>\n<li><a href=\"http:\/\/www.r-project.org\/\">The R project<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/web\/views\/\">CRAN Task Views<\/a>, [descriptions of packages, including:]\n<ul>\n<li><a href=\"http:\/\/cran.r-project.org\/web\/views\/ExperimentalDesign.html\">Design of Experiments<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/web\/views\/Environmetrics.html\">Analysis of Ecological Data<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/web\/views\/Phylogenetics.html\"> Comparative Phylogenetics<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/web\/views\/Spatial.html\">Analysis of Spatial Data<\/a><\/li>\n<\/ul>\n<\/li>\n<li><a href=\"http:\/\/www.rstudio.com\/ide\/\">RStudio <\/a>[the default R-interface for this course]<\/li>\n<\/ul>\n<p><span style=\"text-decoration: underline\"><span style=\"text-decoration: underline\"><strong>Books \/ Guides (online)<br \/>\n<\/strong><\/span><\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/cran.r-project.org\/doc\/contrib\/Paradis-rdebuts_en.pdf\">Paradis, E. 2005. R for Beginners<\/a><\/li>\n<li><a href=\"http:\/\/www.stat.berkeley.edu\/~spector\/R.pdf\">Spector, P. 2004. An introduction to R.<\/a><\/li>\n<li><a href=\"http:\/\/www.math.csi.cuny.edu\/Statistics\/R\/simpleR\/\">Verzani, J. 2002. simpleR.<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/doc\/contrib\/usingR.pdf\">Maindonald, JH. 2008. Using R for data analysis and graphics.<\/a><\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/doc\/contrib\/Seefeld_StatsRBio.pdf\">Seefeld, K &amp; Linder, E. 2007. Statistics using R with biological examples.<\/a><\/li>\n<li><a href=\"http:\/\/dyerlab.bio.vcu.edu\/downloads\/Dyer_Data_Analysis_Using_R.pdf\">Dyer, R. Biological data analysis with R.<\/a><\/li>\n<\/ul>\n<p><strong><span style=\"text-decoration: underline\">Getting Started in R &amp; Cheat Sheets<\/span><\/strong><\/p>\n<ul>\n<li><a href=\"https:\/\/www.computerworld.com\/s\/article\/9239625\/Beginner_s_guide_to_R_Introduction?pageNumber=1\">Machlis, S. 2013. A beginner&#8217;s guide.<\/a> [very useful, with a long list of online resources]<\/li>\n<li><a href=\"http:\/\/cran.cnr.berkeley.edu\/other-docs.html\">Contributed Documentation @ CRAN<\/a> [many good links here]<\/li>\n<li><a href=\"http:\/\/cran.r-project.org\/doc\/contrib\/refcard.pdf\">Baron, J. R reference card.<\/a><\/li>\n<li><a href=\"https:\/\/www.rstudio.com\/resources\/cheatsheets\/\">RStudio cheat sheets<\/a>. Awesome for <a href=\"https:\/\/www.rstudio.com\/wp-content\/uploads\/sites\/2\/2016\/06\/r-cheat-sheet.pdf\">basics<\/a>, \u00a0<a href=\"https:\/\/www.rstudio.com\/wp-content\/uploads\/sites\/2\/2015\/12\/ggplot2-cheatsheet-2.0.pdf\">graphs<\/a>, <a href=\"https:\/\/www.rstudio.com\/wp-content\/uploads\/sites\/2\/2015\/02\/data-wrangling-cheatsheet.pdf\">dplyr<\/a>, and more<\/li>\n<li><a href=\"http:\/\/www.statmethods.net\/\">Quick-R<\/a> [web page, with much good info &amp; links]<\/li>\n<li>Manipulating Data\n<ul>\n<li><a href=\"http:\/\/seananderson.ca\/2013\/12\/01\/plyr.html\">plyr: Split-Apply-Combine for Mortals<\/a><\/li>\n<li><a href=\"http:\/\/blog.datacamp.com\/r-tutorial-apply-family\/\">R tutorial on the Apply family of functions<\/a><\/li>\n<li><a href=\"https:\/\/github.com\/hadley\/dplyr\/blob\/master\/vignettes\/introduction.Rmd\">dplyr Introduction<\/a><\/li>\n<\/ul>\n<\/li>\n<li>Graphing in R\n<ul>\n<li><a href=\"http:\/\/www.noamross.net\/blog\/2013\/11\/20\/formatting-plots-for-pubs.html\">a nice tutorial on ggplot2<\/a><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<p><span style=\"text-decoration: underline\"><strong>R blogs and Forums<\/strong> (because others precede you)<\/span><\/p>\n<ul>\n<ul>\n<li><a href=\"http:\/\/www.r-bloggers.com\/\">R-bloggers<\/a> [central connection to &gt;500 blogs]<\/li>\n<li><a href=\"http:\/\/stackoverflow.com\/\">Stack Overflow<\/a> [popular forum for programmers, much in there on R too]<\/li>\n<li><a href=\"http:\/\/www.inside-r.org\/\">inside-R<\/a> [generally pretty helpful]<\/li>\n<li><a href=\"http:\/\/r.789695.n4.nabble.com\/R-help-f789696.html\">R-help forum<\/a><\/li>\n<li><a href=\"http:\/\/www.r-statistics.com\/\">R-statistics<\/a> (some advanced stats)<\/li>\n<\/ul>\n<\/ul>\n<p>Other stuff<\/p>\n<ul>\n<li><a href=\"http:\/\/www.youtube.com\/watch?v=wki0BqlztCo\">Hadley Wickham on data analysis, dplyr, graphing<\/a><\/li>\n<li><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Why use R? Muenchen, RA. The popularity of data analysis software Muenchen, RA. Trends in the analytics job market R &amp; RStudio Links swirl &#8211; a great way to learn your way around R The R project CRAN Task Views, &hellip; <a href=\"https:\/\/sciences.ucf.edu\/biology\/jenkins\/classes\/pcb-6466\/r-resources\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":34,"featured_media":0,"parent":484,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-613","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.5 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>R Resources - UCF d3 ecology lab<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sciences.ucf.edu\/biology\/jenkins\/classes\/pcb-6466\/r-resources\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"R Resources - UCF d3 ecology lab\" \/>\n<meta property=\"og:description\" content=\"Why use R? 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